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Enterovirus detection in different regions of Madagascar reveals a higher abundance of enteroviruses of species C in areas where several outbreaks of vaccine-derived polioviruses occurred | BMC Infectious Diseases

Poliomyelitis outbreaks due to pathogenic vaccine-derived polioviruses (VDPVs) are threatening and complicating the global polio eradication initiative. Most of these VDPVs are genetic recombinants with non-polio enteroviruses (NPEVs) of species C. Little is known about factors favoring this genetic macroevolution process. Since 2001, Madagascar has experienced several outbreaks of poliomyelitis due to VDPVs, and most of VDPVs were isolated in the south of the island. The current study explored some of the viral factors that can promote and explain the emergence of recombinant VDPVs in Madagascar. Between May to August 2011, we collected stools from healthy children living in two southern and two northern regions of Madagascar. Virus isolation was done in RD, HEp-2c, and L20B cell lines, and enteroviruses were detected using a wide-spectrum 5ʹ-untranslated region RT-PCR assay. NPEVs were then sequenced for the VP1 gene used for viral genotyping. Overall, we collected 1309 stools, ....

United Kingdom , Languedoc Roussillon , Beckman Coulter Genomics Company Genewiz , Global Polio Laboratory Network , Modified Eagle Medium , Polio Laboratory Network , Intratypic Detection , Roche Diagnostics , Beckman Coulter Genomics Company , Genewiz Company , Codoncode Aligner , Maximum Likelihood ,

Lineages of monkeypox virus in the United States

In a recent work posted to the bioRxiv preprint server, researchers analyzed various monkeypox virus (MPXV) lineages identified recently in the United States (US). ....

United States , Image Credit , Congo Basin , West African , Supplemental Table , Median Joining , Monkeypox West African Selective , Maximum Likelihood , Genomic Sequencing , Single Nucleotide Polymorphism ,