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Nanotechnology Now - Press Release: Bioinformatics tool accurately tracks synthetic: DNA Computer scientists show benefits of bioinformatics with PlasmidHawk


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Home > Press > Bioinformatics tool accurately tracks synthetic: DNA Computer scientists show benefits of bioinformatics with PlasmidHawk
The Rice University computer science lab of Todd Treangen challenged and beat deep learning in a test to see if a new bioinformatics approach effectively tracks the lab of origin of a synthetic genetic sequence.
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Tommy LaVergne/Rice University
Abstract:
Tracking the origin of synthetic genetic code has never been simple, but it can be done through bioinformatic or, increasingly, deep learning computational approaches.
Bioinformatics tool accurately tracks synthetic: DNA Computer scientists show benefits of bioinformatics with PlasmidHawk
Houston, TX | Posted on February 26th, 2021 ....

Rice University , United States , Bryce Kille , Todd Treangen , Mike Williams , Ryan Leo Elworth , Rui Liu , Qi Wang , Jeff Falk , Nature Communications , Research Awards Scholarships Gifts Contests Honors Records , National Institutes Of Health , Natural Sciences , Tommy Lavergne Rice University , Rice University Brown School Of Engineering , Army Research Office , Baker Institute For Public , National Intelligence , National Institute For Neurological Disorders , Wave Inc , Princeton Review , Home Press Bioinformatics , Plasmidhawk Houston , Brown School , Tian Rui Liu , National Institutes ,

Bioinformatics tool accurately tracks synthetic DNA


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IMAGE: The Rice University computer science lab of Todd Treangen challenged and beat deep learning in a test to see if a new bioinformatics approach effectively tracks the lab.
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Credit: Tommy LaVergne/Rice University
HOUSTON - (Feb. 26, 2021) - Tracking the origin of synthetic genetic code has never been simple, but it can be done through bioinformatic or, increasingly, deep learning computational approaches.
Though the latter gets the lion s share of attention, new research by computer scientist Todd Treangen of Rice University s Brown School of Engineering is focused on whether sequence alignment and pan-genome-based methods can outperform recent deep learning approaches in this area. ....

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