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Zymo Research veröffentlicht Open-Source-Bioinformatik-Pipeline für die Erkennung von SARS-CoV-2-Varianten in Abwässern

Zymo Research veröffentlicht Open-Source-Bioinformatik-Pipeline für die Erkennung von SARS-CoV-2-Varianten in Abwässern
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Zymo Research Releases Open-Source Bioinformatics Pipeline for [...] | Comunicati stampa CataniaOggi

11 maggio 2021 11:10
Fonte: Adnkronos
#salute-e-benessere
Early Release of the VirSieve™ Bioinformatics Pipeline Will Promote Collaboration in Environmental SARS-CoV-2 Research
IRVINE, Calif., May 11, 2021 /PRNewswire/ Zymo Research has released the VirSieve™ Bioinformatics Pipeline source code to the environmental microbiology community to promote global collaboration and support for the detection of SARS-CoV-2 variants in wastewater. VirSieve™ is an automated computational pipeline that analyzes sequencing reads from the SARS-CoV-2 virus in wastewater samples to better understand viral variants present in monitored communities. By rating the confidence interval in observed viral mutations, the software has the potential to significantly increase the accuracy of analyzing any changes in the viral genetic material. ....

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Zymo Research Releases Open-Source Bioinformatics Pipeline for SARS-CoV-2 Variant Detection in Wastewater

Zymo Research Releases Open-Source Bioinformatics Pipeline for SARS-CoV-2 Variant Detection in Wastewater
Bioinformatics Pipeline Will Promote Collaboration in Environmental SARS-CoV-2 Research
IRVINE, Calif., May 11, 2021 /PRNewswire/ Zymo Research has released the VirSieve
Bioinformatics Pipeline source code to the environmental microbiology community to promote global collaboration and support for the detection of SARS-CoV-2 variants in wastewater. VirSieve
is an automated computational pipeline that analyzes sequencing reads from the SARS-CoV-2 virus in wastewater samples to better understand viral variants present in monitored communities. By rating the confidence interval in observed viral mutations, the software has the potential to significantly increase the accuracy of analyzing any changes in the viral genetic material. ....

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Zymo Research releases bioinformatics pipeline for SARS-CoV-2 variant detection

IRVINE, Calif., May 11. /PRNewswire/ Zymo Research has released the VirSieve
™ Bioinformatics Pipeline source code to the environmental microbiology community to promote global collaboration and support for the detection of SARS-CoV-2 variants in wastewater. VirSieve
™ is an automated computational pipeline that analyzes sequencing reads from the SARS-CoV-2 virus in wastewater samples to better understand viral variants present in monitored communities. By rating the confidence interval in observed viral mutations, the software has the potential to significantly increase the accuracy of analyzing any changes in the viral genetic material.
According to the Centers for Disease Control and Prevention, while the deployment of vaccines has had a tremendous positive impact on curbing the SARS-CoV-2 pandemic within the USA, new viral strains are still emerging. Some of these strains, e.g., B.1.1.7, are classified as variants of concern due to evidence of increased ....

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New High-Resolution Imaging Technology Reveals COVID-19 Lung Pathology in Space and Time

New High-Resolution Imaging Technology Reveals COVID-19 Lung Pathology in Space and Time
April 1, 2021
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Using a new method called ‘high parameter imaging mass cytometry’ scientists visualize detailed cellular landscapes of the lung in infectious lung diseases at never-before-seen, single-cell resolution.
With this new technique, investigators at Weill Cornell Medicine and New York-Presbyterian target the expression of 36 proteins, to probe into the cellular composition and spatial architecture of human acute lung injury including lung tissue infected by SARS-CoV-2, the coronavirus that causes COVID-19.
Nature. The findings provide new insights into the causes of damage in these infectious lung diseases and a detailed resource for future investigations. ....

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