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Weill Cornell study: New species are all around us


Dr. Christopher Mason/Provided
Left: Heba Shabaan, a third-year medical student at Weill Cornell Medical College and Dr. Christopher Mason prepare to swab for microbes in the NYC subway system on June 21, 2020. Right: Subway turnstile being swabbed.
Weill Cornell study: New species are all around us
May 27, 2021
About 12,000 bacteria and viruses collected in a sampling from public transit systems and hospitals around the world from 2015 to 2017 had never before been identified, according to a study by the International MetaSUB Consortium, a global effort at tracking microbes that is led by Weill Cornell Medicine investigators.
For the study, published May 26 in Cell, international investigators collected nearly 5,000 samples over a three-year period across 60 cities in 32 countries and six continents. The investigators analyzed the samples using a genomic sequencing technique called shotgun sequencing to detect the presence of various microbes, inc ....

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Global study of 60 cities' microbes finds each has a signature microbial fingerprint

Different cities have their own microbial fingerprint, a global study reports


Different cities have their own microbial fingerprint, a global study reports
If you gave me your shoe, I could tell you with about 90% accuracy the city you came from, the authors boast.
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An international team of researchers says that every city has its own fingerprint in the shape of pathogens.
Image credits Denis Poltoradnev.
The largest ever genetic study of urban microbiomes (including both surfaces and the air in 60 cities worldwide) reports that each city has its own microbial fingerprint. The project sequenced and analyzed samples from public transit systems and hospitals in cities around the world, identifying thousands of viruses, bacteria, and two archaea not found in reference databases. ....

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Global study finds each city has unique microbiome fingerprint of bacteria


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Each city has its own unique microbiome, a fingerprint of viruses and bacteria that uniquely identify it, according to a new study from an international consortium of researchers that included a team from the University of Maryland School of Medicine (UMSOM). The international project, which sequenced and analyzed samples collected from public transit systems and hospitals in 60 cities around the world, was published today in the journal
Cell.
The research is considered to be the largest-ever global metagenomic study of urban microbiomes, spanning both the air and the surfaces of multiple cities. It features a comprehensive analysis for all the microbial species identified including thousands of viruses and bacteria and two newly identified single-cell organisms not found in reference databases. ....

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